Meta-Research: International authorship and collaboration across bioRxiv preprints | eLife

Abstract:  Preprints are becoming well established in the life sciences, but relatively little is known about the demographics of the researchers who post preprints and those who do not, or about the collaborations between preprint authors. Here, based on an analysis of 67,885 preprints posted on bioRxiv, we find that some countries, notably the United States and the United Kingdom, are overrepresented on bioRxiv relative to their overall scientific output, while other countries (including China, Russia, and Turkey) show lower levels of bioRxiv adoption. We also describe a set of ‘contributor countries’ (including Uganda, Croatia and Thailand): researchers from these countries appear almost exclusively as non-senior authors on international collaborations. Lastly, we find multiple journals that publish a disproportionate number of preprints from some countries, a dynamic that almost always benefits manuscripts from the US.

 

Scientific globalism during a global crisis: research collaboration and open access publications on COVID-19

Abstract:  This study sought to understand the nature of scientific globalism during a global crisis, particularly COVID-19. Findings show that scientific globalism occurs differently when comparing COVID-19 publications with non-COVID-19 publications during as well as before the pandemic. Despite the tense geopolitical climate, countries increased their proportion of international collaboration and open-access publications during the pandemic. However, not all countries engaged more globally. Countries that have been more impacted by the crisis and those with relatively lower GDPs tended to participate more in scientific globalism than their counterparts.

 

Preprint Servers in Kidney Disease Research | American Society of Nephrology

Abstract:  Preprint servers, such as arXiv and bioRxiv, have disrupted the scientific communication landscape by providing rapid access to research before peer review. medRxiv was launched as a free online repository for preprints in the medical, clinical, and related health sciences in 2019. In this review, we present the uptake of preprint server use in nephrology and discuss specific considerations regarding preprint server use in medicine. Distribution of kidney-related research on preprint servers is rising at an exponential rate. Survey of nephrology journals identified that 15 of 17 (88%) are publishing original research accepted submissions that have been uploaded to preprint servers. After reviewing 52 clinically impactful trials in nephrology discussed in the online Nephrology Journal Club (NephJC), an average lag of 300 days was found between study completion and publication, indicating an opportunity for faster research dissemination. Rapid review of papers discussing benefits and risks of preprint server use from the researcher, publisher, or end user perspective identified 53 papers that met criteria. Potential benefits of biomedical preprint servers included rapid dissemination, improved transparency of the peer review process, greater visibility and recognition, and collaboration. However, these benefits come at the risk of rapid spread of results not yet subjected to the rigors of peer review. Preprint servers shift the burden of critical appraisal to the reader. Media may be especially at risk due to their focus on “late-breaking” information. Preprint servers have played an even larger role when late-breaking research results are of special interest, such as during the global coronavirus disease 2019 pandemic. Coronavirus disease 2019 has brought both the benefits and risks of preprint servers to the forefront. Given the prominent online presence of the nephrology community, it is poised to lead the medicine community in appropriate use of preprint servers.

 

Distributed Open Collaborative Scholarship · Commonplace

“Distributed Open Collaborative Scholarship (DOCS) is a major new initiative that aims to redirect the technologization of knowledge by building structures (disciplines, practices, ethics) and infrastructures around a new ecological economics of teaching and learning, research and publishing. It builds on existing interventions such as FemTechNet, a Distributed Open Collaborative Course for students, scholars and artists working on feminist science and technology studies2; Fembot/Ada, a research collective and associated open access publication3; Goldsmiths Press, a new university press in the UK, dedicated to challenging the restrictions of neoliberal scholarship;4 Humanities Commons, a US project bringing together open access scholarship and teaching materials in the humanities5 and open access platforms such as arXiv.org and SOCarXiv.6

DOCS is a necessary addition to the current landscape because much of the current activity either sits within or fails to challenge neoliberal values that apply across the entire ecology of teaching and learning, research and publishing and incorporate both the sciences and humanities. Neoliberal economies promote and support open science at the expense of open humanities and globally, Arts, Humanities and Social Science disciplines are under threat. The development of commercial platform based publishing and scholarship, such as academia.edu, tends to be parasitic on both publishers and the academy, extracting published research with no reciprocal financial contribution. Moreover, by selling data based on research hits and trends, it represents something like the Twitter model for the future dystopia of scholarly communications in which the value of knowledge itself, and its social and environmental agency is subordinated to its economic value. Commercial platforms represent the next phase in the capitalization of knowledge and tend towards replacing old monopolies for new, the giants of commercial journal publishing with tech giants such as Amazon and Google….”

Welcome — The Turing Way

“The Turing Way is an open source community-driven guide to reproducible, ethical, inclusive and collaborative data science.

Our goal is to provide all the information that data scientists in academia, industry, government and in the third sector need at the start of their projects to ensure that they are easy to reproduce and reuse at the end.

The book started as a guide for reproducibility, covering version control, testing, and continuous integration. But technical skills are just one aspect of making data science research “open for all”.

In February 2020, The Turing Way expanded to a series of books covering reproducible research, project design, communication, collaboration, and ethical research.”

A Community Handbook for Open Data Science

“The Turing Way started in December 2018 and has quickly evolved into a collaborative, inclusive and international endeavor with the aim of uncovering gold standards to ensure reproducible, ethical, inclusive and collaborative data science. How did this happen? I think two ingredients were central to The Turing Way‘s success: extraordinary community building and a clear enticing vision….

Anyone can contribute is a central theme. And not only that: anyone can bring ideas to the table. And folks are doing just that. At the time of writing this post 168 people have contributed. So on average the project has gained 9 new contributors every month since it’s initiation….”

Can open, collaborative tactics help us crack COVID-19? | Opensource.com

“At least 109 organizations are currently working on treatment for COVID-19. But many researchers believe an approved, effective vaccine against the coronavirus will not be available in 2020.

But what would happen if these organizations collaborated on a global scale? What if they adopted open organization principles to accelerate the work of finding a treatment and cure?

In this article, I’ll examine how that might be possible. And I’ll explain one initiative that seems to be doing it….”